prolfqua: A comprehensive R package for protein differential expression analysis
Mass spectrometry is an essential tool for quantifying the presence of various peptides and proteins in biological samples. To streamline this analysis, the Proteome Informatics FGCZ group led by Christian Panse has developed the R package prolfqua. In this in silico talk, Witold Wolski introduces the package's design and how to use it to analyze the differential expression of peptides or proteins. If you are interested in protein quantification using mass spectrometry and differential expression analysis, this talk is for you!
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Wolski et al., prolfqua: A Comprehensive R-Package for Proteomics Differential Expression Analysis. Journal of proteome research 2023.