Articles évalués par des pairs et prépublications de nos membres

Publications scientifiques 2026

La bioinformatique est devenue indispensable pour convertir les questions biologiques en réponses. Découvrez l'étendue des travaux et des contributions de nos scientifiques à travers leurs publications.

Source : Europe PMC, dernière mise à jour : 01.03.26

Découvrez les Remarkable Outputs 2024 du SIB

Les Remarkable Outputs sont sélectionnés par le comité du prix afin de présenter à la communauté les réalisations annuelles des scientifiques du SIB qui méritent particulièrement d'être soulignées. Des nouveaux algorithmes permettant de détecter les gènes liés à des maladies à l'exploration des origines de la reproduction sexuée, découvrez cette liste restreinte de publications, d'outils logiciels, de bases de données et de projets de vulgarisation.

Articles évalués par des pairs et prépublications

  1. Aarts EM, Laman Trip DS, Neatu R, Martin CG, Riley B, Kraus A, Green A, Al-Hamed MH, Armstrong RE, Sayer JA, Bachmann-Gagescu R, Beltrao P. Network-based framework for studying etiology and phenotypic diversity in primary ciliopathies. Genome Biol 2026
  2. Anchieri L, G Amorim CE, Neuenschwander S, Malaspinas AS. Assessing Ancient DNA Sampling Strategies for Natural Selection Inference in Humans Using Allele Frequency Time Series Data. Genome Biol Evol 2026;18(2):evaf234
  3. Andreatta M, Carmona SJ. UCell and pyUCell: single-cell gene signature scoring for R and Python. Bioinformatics 2026;42(2):btag055
  4. Aton M, McDonald D, Cañardo Alastuey J, Azom R, Batra P, Bezshapkin V, Bolyen E, Cagle A, Caporaso JG, Debelius JW, Gorlick K, Hamsanipally N, Hunger L, Keluskar A, Liao D, Lu YY, Navas-Molina JA, Pitman A, Rideout JR, Sazonov A, Sathappan B, Schwarzberg Lipson K, Sfiligoi I, Tapo C, Vázquez-Baeza Y, Wu Z, Xu ZZ, Ye MS, Zhao J, Knight R, Morton JT, Zhu Q. Scikit-bio: a fundamental Python library for biological omic data analysis. Nat Methods 2026;23(2):274-276
  5. Bacon WA, Batut B, Srikakulam SK, Zierep P, Bretaudeau A, Grüning B, Le Corguillé G, Hecht H, Davis JY, Hotz HR, Serrano-Solano B. Ten common misconceptions about Galaxy (and why they are wrong!). PLoS Comput Biol 2026;22(2):e1013869
  6. Barua A, Srivastava M, Beinsteiner B, Laudet V, Robinson-Rechavi M. Estimates of molecular convergence reveal multiple genes with adaptive variation across teleost fish. Mol Biol Evol 2026;43(1):msag015
  7. Bejarano L, Hernández-Barranco A, Roh V, Méndez RS, Lamprou E, Costa CF, Ballabio M, Hegi ME, Fournier N, Joyce JA. Tumor-derived aminopeptidase N promotes early stages of brain metastatic colonization. Cell Rep 2026;45(2):116895
  8. Bolli E, Wirapati P, Hicham M, Xie Y, Siwicki M, Duval F, Goubet AG, Kiss M, Zitti B, Zwahlen T, Mcdowell S, Bill R, Angerani S, Engblom C, Anderson S, Jiang A, Hartley O, Sykes DB, Jankovic M, Fournier N, Gunzer M, Tarussio D, Tissot S, Sadow PM, Faquin WC, Sade-Feldman M, Weissleder R, Pai S, Mercier F, Manguso R, Pittet MJ. CCL3 is produced by aged neutrophils across cancers and promotes tumor growth. Cancer Cell 2026:S1535-6108(26)00045-0
  9. Bozzi D, Broomandkhoshbacht NZ, Delgado M, Buikstra JE, Amorim CEG, Kassadjikova K, Estrada MP, Greub G, Rascovan N, Šmajs D, Fehren-Schmitz L, Malaspinas AS, Nelson EA. A 5500-year-old <i>Treponema pallidum</i> genome from Sabana de Bogotá, Colombia. Science 2026;391(6783):eadw3020
  10. Charmoy M, Maier JM, Wyss T, Chennupati V, Sabatel C, Bonneaux L, Dumez A, Veber R, Guarda G, Held W. Memory-like CD8<sup>+</sup> T cells lacking PD-1 adapt to persistent stimulation by reducing TCR signal transduction rather than increasing exhaustion. Front Immunol 2026;17:1743170
  11. Ciancaglini M, Avanthay R, Marx AF, Abreu-Mota T, Finozzi D, Fixemer J, Geier F, Burri D, Wagner I, Vincenti I, Kreuzfeldt M, Merkler D, Zimmer G, Pinschewer DD. Non-cytolytic re-engineering of a viral vaccine vector enables durable effector-memory T cell immunity by reinforcing type I IFN induction. Mol Ther Nucleic Acids 2026;37(1):102852
  12. Ciernik L, Kraft A, Barkmann F, Yates J, Boeva V. Robust and efficient annotation of cell states through gene signature scoring. Genome Res 2026
  13. Cina A, Monzon M, Galbusera F, Jutzeler CR. Quantifying central canal stenosis prediction uncertainty in SpineNet with conformal prediction. Sci Rep 2026;16(1):4963
  14. Coumau C, Gaspar F, Zayene M, Bertrand E, Alberio L, Lovis C, Beeler PE, Rinaldi F, Lutters M, Le Pogam MA, Csajka C, SwissMADE Collaborators. Detection of Antithrombotic-Related Bleeding in Older Inpatients: Multicenter Retrospective Study Using Structured and Unstructured Electronic Health Record Data. J Med Internet Res 2026;28:e77809
  15. Crowell HL, Llaó-Cid L, Frigola G, Gunz S, Ruano I, Lorden P, Ruiz M, Kulis M, Martin-Subero JI, Heyn H, Campo E, Pascual-Reguant A. A Transcriptional Map of Human Tonsil Architecture: Beyond the Sum of (Single Cell) Parts. Eur J Immunol 2026;56(1):e70121
  16. Deng Z, Sanchis-López C, Hernández-Plaza A, Davín AA, Huerta-Cepas J. TreeProfiler: large-scale metadata profiling along gene and species trees. Mol Biol Evol 2026;43(2):msag028
  17. Dlamini Z, Kahraman A, Chatziioannou A. Editorial: Precision oncology in checkpoint immunotherapy: leveraging predictive biomarkers for personalized treatment. Front Immunol 2025;16:1772930
  18. Dreifuss D, Topolsky I, Icer Baykal P, Beerenwinkel N. Tracking SARS-CoV-2 genomic variants in wastewater sequencing data with LolliPop. PLoS Comput Biol 2026;22(2):e1014003
  19. Duroux D, Melograna F, Climente-González H, Fan B, Walakira A, Gervasoni EE, Li Z, Roqueiro D, Stella F, Van Steen K. Turning heterogeneity of statistical epistasis networks to an advantage. Brief Bioinform 2026;27(1):bbaf699
  20. Duroux D, Meyer PP, Visonà G, Beerenwinkel N. Generalizable machine learning models for rapid antimicrobial resistance prediction in unseen health care settings. Gigascience 2026;15:giaf156
  21. Falquet M, El Ahanidi H, Gomez-Cadena A, Su Z, Cornu A, Wyss T, Kizil B, Pick R, Falamaki K, Wirapati P, Fiordi B, Senoner I, Maresca DC, Kallal N, Guedj D, Kreutzfeldt M, Tille JC, Leblond MM, Michaud K, Pesce S, Candiani S, Golebski K, Dagher J, Charrier M, Pressacco Brossier C, Grobet-Jeandin E, Marone R, Hugues S, Jeker LT, Verdeil G, Merkler D, Marcenaro E, Scheiermann C, Attaleb M, Benamran D, Tsantoulis P, Ercolano G, Trabanelli S, Jandus C. Mast-cell derived nerve growth factor drives ILC2 pro-tumoral functions in bladder cancer. Nat Commun 2026
  22. Firtina C, Mordig M, Mustafa H, Goswami S, Ghiasi NM, Mercogliano S, Eris F, Lindegger J, Kahles A, Mutlu O. Rawsamble: Overlapping Raw Nanopore Signals using a Hash-based Seeding Mechanism. Bioinformatics 2026:btag087
  23. Gadiya Y, Millán Acosta J, Ammar A, Adriaque Lozano A, Wetstede D, Martinát D, Sima AC, Mei H, Willighagen E, Abbassi-Daloii T. pyBiodatafuse: extending interoperability of data using modular queries across biomedical resources. Bioinformatics 2026;42(3):btag064
  24. Gaio D, Tackmann J, Perez-Molphe-Montoya E, Näpflin N, Patsch D, Malfertheiner L, Peluso ME, von Mering C. Enhanced semantic classification of microbiome sample origins using Large Language Models (LLMs). Gigascience 2026:giag015
  25. Gankin D, Beltrao P. The AlphaGenome deep learning model predicts effects of non-coding variants. Nat Struct Mol Biol 2026
  26. Giagiozis M, Curt A, Jutzeler CR, Zariffa J. Video summarization for home-based egocentric footage in spinal cord injury rehabilitation. Biomed Eng Online 2026;25(1):17
  27. Grover A, Muser T, Kasak L, Zhang L, Krymova E, Boeva V. Early feature extraction drives model performance in high-resolution chromatin accessibility prediction. Genome Res 2026
  28. Guo Y, Mallona I, Robinson MD, Li L. BiCLUM: Bilateral contrastive learning for unpaired single-cell multi-omics integration. PLoS Comput Biol 2026;22(2):e1013932
  29. Haemmerli P, Hubert M, Gaudry A, Quiros-Guerrero LM, Mehl F, Pagni M, Marcourt L, Kirchhoffer OA, Grondin A, Constant S, Huang S, Queiroz EF, Clément S, Tapparel C, Wolfender JL. An innovative approach for anti-respiratory syncytial virus compound discovery from plant extracts, combining high-throughput screening and metabolomics. Biomed Pharmacother 2026;194:118917
  30. Hernández-Plaza A, Deng Z, Robledo-Yagüe F, Szklarczyk D, von Mering C, Bork P, Huerta-Cepas J. eggNOG v7: phylogeny-based orthology predictions and functional annotations. Nucleic Acids Res 2026;54(d1):D402-D408
  31. Huang Q, Szklarczyk D, Oehninger J, von Mering C. PaxDb v6.0: reprocessed, LLM-selected, curated protein abundance data across organisms. Nucleic Acids Res 2026;54(d1):D427-D439
  32. Jauch AJ, Schmidt-Barbo P, Schultheiss C, Silling G, Hänel M, Chromik J, Stauch T, Trautmann-Grill K, Repp R, Schulte C, Fleischmann B, Welslau M, Stauch M, Quiering C, Richter F, Tesanovic T, Jahn S, Bignucolo O, Holbro A, Passweg JR, Matzdorff A, Rummel M, Meyer O, Nimmerjahn F, Binder M. Efficacy and safety of eltrombopag in combination with dexamethasone as first-line treatment in adult patients with newly diagnosed immune thrombocytopenia. Br J Haematol 2026;208(2):789-793
  33. Ju W, Nair V, Vart P, Smeijer JD, Hudkins KL, Moedt E, Larkina M, Perco P, Burdet F, Shedden K, Hwang M, Lee E, O'Connor C, Hartman J, Subramanian L, Bitzer M, Ibberson M, Duffin KL, Gomez MF, Alpers CE, Kretzler M, Heerspink HJL. Urinary clusterin as a biomarker of human kidney disease progression and response to the endothelin receptor antagonist atrasentan: An exploratory analysis from the SONAR trial. Nat Commun 2026
  34. Killer HE, Pircher A, Stekhoven DJ. Reassessment of the Collaborative Normal-Tension Glaucoma Study: Statistical Evidence and Implications for Current Management. Ophthalmol Ther 2026;15(2):761-770
  35. Kondrateva O, Sonay TB, Zlobec I, Anisimova M. Tumor mutational burden predicts neoantigen profiles and immunotherapy response in microsatellite stable tumors across different cancer types. Front Immunol 2025;16:1582464
  36. Kopp OS, Morandi SC, Kreuzer M, Uldry A-C, Eldridge N, Zinkernagel MS, Zysset-Burri DC. Impact of contact lenses on the ocular surface microbiome, tear proteome, and dry eye disease. Microbiol Spectr 2026:e0226425
  37. Koptekin D. pygenstrat: a Python package for EIGENSTRAT data processing. Bioinform Adv 2026;6(1):vbag022
  38. Kossmann D, Iizuka A, Khanna N, Rivera-Fuentes P. A Ratiometric pH Sensor for Gram-Positive and Gram-Negative Bacteria. J Am Chem Soc 2026;148(4):4754-4765
  39. Lawless D, Saadat A, Oumelloul MA, Boutry S, Stadler V, Österle S, Armida J, Haerry D, Froese DS, Schlapbach LJ, Fellay J. Application of qualifying variants for genomic analysis. Bioinformatics 2026;42(2):btaf676
  40. Lepik K, Auwerx C, Sadler MC, van der Graaf A, Ojavee SE, Kutalik Z. LiMA: Robust inference of molecular mediation from summary statistics. Am J Hum Genet 2026;113(1):202-220
  41. Long F, Ghosh A, Xu T, Ding L, Wu C, Khandelwal R, Noé F, Sun W, Dong H, Wang T, Hoffmann A, Gardeux V, Deplancke B, Abu-Nawwas L, Stefanicka P, Varga L, Ruiz JR, Blüher M, Balaz M, Sharma AK, Wolfrum C. MEDAG functions as an A-kinase-anchoring protein in adipocytes. Mol Cell 2026:S1097-2765(26)00096-1
  42. Malfertheiner L, Tackmann J, Matias Rodrigues JF, von Mering C. Community conservatism is widespread across microbial phyla and environments. Nat Ecol Evol 2026;10(2):232-245
  43. Marchi NA, Solelhac G, Imler T, Ericson I, Haba-Rubio J, Marques-Vidal P, Vollenweider P, Kutalik Z, Strippoli MF, Pistis G, Preisig M, von Gunten A, Draganski B, Heinzer R. Periodic limb movements during sleep, restless legs syndrome, and cognitive changes in older adults: a population-based longitudinal study. Sleep2026;49(2):zsaf327
  44. Marrec L, Lehtinen S. Cluster dispersal shapes microbial diversity during community assembly. PLoS Comput Biol 2026;22(2):e1013918
  45. Marrec L. Impact of genotype-dependent dispersal on mutation fixation in subdivided populations. J Evol Biol 2026;39(2):262-271
  46. Matias Rodrigues JF, Tackmann J, Malfertheiner L, Patsch D, Perez-Molphe-Montoya E, Näpflin N, Gaio D, Rot G, Danaila M, Peluso ME, Dmitrijeva M, Schmidt TSB, von Mering C. The MicrobeAtlas database: Global trends and insights into Earth's microbial ecosystems. Cell 2026:S0092-8674(26)00108-X
  47. Mehr S, Castoe T, Daly M, Jungo F, Kirchhoff KN, Koludarov I, Mackessy SP, Macrander J, Naidu P, Modica MV, Sanchez EE, Zancolli G, Holford M. A Proposed Unified, Scalable Platform for Integrative Research on Venomous Species. Gigascience 2026:giaf153
  48. Mlakar V, Jurković Mlakar S, Gloor Y, Dupanloup I, Sarmiento Y, Boudal-Khosbheen M, Marino D, Uppugunduri CRS, Ansari M. Busulfan resistance in AML is associated with changes in mitochondrial copy number and lipid metabolism. Sci Rep 2026
  49. Morales-Tirado A, Blitz-Castro E, Tabares-González A, Gascón-Galindo C, Vicente-Santamaría S, Luna-Paredes C, Salcedo-Lobato E, Boutry S, Lamas-Ferreiro A. Long-term Outcomes of Pediatric CFSPID: A 15-Year Clinical and Genomic Study Across Newborn Screening Cystic Fibrosis Units. Arch Bronconeumol2026:S0300-2896(26)00006-2
  50. Moretti S, Niknejad A, Pagni M, Mehl F. MetaNetX: a bridge between metabolic resources for enhanced curation and multi-omics data harmonization. Nucleic Acids Res 2026;54(d1):D617-D622
  51. Mulberry N, Stadler T. Strategies for resolving cellular phylogenies from sequential lineage tracing data. Theor Popul Biol 2026;168:32-43
  52. Munteanu V, Saldana MA, Dreifuss D, Ouyang WO, Ferdous J, Mohebbi F, Roseberry JS, Ciorba D, Bostan V, Gordeev V, Drabcinski N, Su JM, Kasianchuk N, Sharma NK, Knyazev S, Aßmann E, Lobiuc A, Covasa M, Crandall KA, Wu NC, Mason CE, Tierney BT, Lucaci AG, Ophoff RA, Gibas C, Rzymski P, Skums P, Solo-Gabriele H, Niko B, Zelikovsky A, Hölzer M, Smith A, Mangul S. SARS-CoV-2 wastewater genomic surveillance: approaches, challenges, and opportunities. Genome Biol 2026;27(1):1
  53. Muralidharan A, Costa AR, Fierlier D, van den Berg DF, van den Bossche H, Zoumaro-Djayoon AD, Rodríguez-Molina A, Pabst M, Pacesa M, Correia BE, Brouns SJJ. Molecular basis for anti-jumbo phage immunity by AVAST type 5. Mol Cell 2026;86(4):740-756.e9
  54. Neher RA, Huddleston J, Bedford T, Lewis NS, Harvey R, Galiano M, Byrne AMP, James S, Smith D, Łuksza M, Ruchnewitz D, Laessig M, Fujisaki S, Watanabe S, Hasegawa H, Hassell N, Wentworth DE, Kondor R, Deng YM, Dapat C, Subbarao K, Barr I. Nomenclature for Tracking of Genetic Variation of Seasonal Influenza Viruses. Influenza Other Respir Viruses 2026;20(2):e70230
  55. Ortín Vela S, Bergmann S. Cross-organ analysis reveals associations between vascular properties of the retina, the carotid and aortic arteries, and the brain. Commun Med (Lond) 2026;6(1):102
  56. Pecnik J, Ventresca Miller AR, Panse C, Kunz L, Dittmann A, Johnson JA, Makhortykh S, Litvinova L, Andrukh S, Toschev G, Krützen M, Schuenemann VJ, Wilkin S. Paleo-proteomic analysis of Iron Age dental calculus provides direct evidence of Scythian reliance on ruminant dairy. PLoS One 2026;21(1):e0339464
  57. Perez MAS, Zoete V. Universal paratope-epitope interaction patterns in antibody-antigen structures. Protein Sci 2026;35(1):e70401
  58. Postma A, Klynsmith L, Duong TA, Allison JD, Smidt W, Waterhouse RM, Lesny P, Oeyen JP, Petersen M, Martin S, Liu S, Zhou X, Ziesmann T, Donath A, Mayer C, Misof B, Niehuis O, Peters RS, Podsiadlowski L, Coetzee MPA, Joubert F, Slippers B. Genome and transcriptome-based identification and expression profiling of chemosensory gene families across developmental stages and tissues in Sirex noctilio (Hymenoptera: Siricidae). Insect Mol Biol 2026
  59. Poveda L, Farrell G, Tosatto SCE, Zahn-Zabal M, Ruch P, Gobeill J, Waterhouse RM, Dessimoz C. The missing link in FAIR data policy: biodata resources in life sciences. Sci Data 2026
  60. Proietti L, Beltrao P, Bruna A, Cortés-Ciriano I, Garnett MJ, Gonçalves E, Herranz-Ors C, Kaulich M, Lord CJ, Petsalaki E, Rad R, Ryan CJ, Savino A, Sesia D, Wessels L, Iorio F. Genetic interactions, synthetic lethality and complexity in cancer vulnerability mapping-Insights and perspectives from the 2nd EuroDepMap symposium. FEBS Lett 2026
  61. Prélot L, Chen J, Hüser M, Kahles A, Rätsch G. ImmunoPepper: extracting personalized peptides from complex splicing graphs. Bioinformatics 2026;42(1):btaf492
  62. Pu T, Peddle AM, Wirapati P, Tsantoulis P, Wu Q, Hong Y, Samuel L, Desai J, Riener M, Saridaki Z, Cunningham D, Tejpar S. Exploratory biomarker analysis of RAS/BRAF somatic mutations and gene expression signatures for predicting treatment effects of aflibercept in the velour trial. NPJ Precis Oncol 2026;10(1):50
  63. Reichel K, Pohjoismäki J, Astrin JJ, Böhne A, Bortoluzzi C, Bužan E, Del Campo J, Ciofi C, Di-Nizo CB, Divakar PK, Greve C, Hampl V, Hilgers L, Laine VN, Leonard JA, Lozano-Fernandez J, Lukić Bilela L, Mazzoni CJ, McCartney AM, Melo-Ferreira J, Monteiro R, Oomen RA, Pavlek M, Pimenta J, Rindos M, Seehausen O, Tarieiev A, Tomasello S, Vinnere Pettersson O, Waterhouse RM, Weber AA, Zinenko O, de Guttry C. From Permits to Samples: Addressing Key Challenges for High-Quality Reference Genome Generation in Europe. Mol Ecol Resour 2026;26(2):e70100
  64. Ruiz-López MJ, Cebrián-Camisón S, Irisarri I, Magallanes S, Martínez-de la Puente J, Figuerola J, Waterhouse RM, Wellcome Sanger Institute Tree Of Life Management Samples And Laboratory Team, Wellcome Sanger Institute Scientific Operations Sequencing Operations, Wellcome Sanger Institute Tree Of Life Core Informatics Team, Haggerty L, Martin F, Brown T. ERGA-BGE Genomes of Culex laticinctus, Culex modestus, Culex perexiguus, and Culex theileri: Unveiling the Genomes of the Key Vectors of West Nile Virus in the Mediterranean Basin. Genome Biol Evol 2026;18(2):evaf245
  65. Rutz A, Probst D, Aguilar C, Akiyama DY, Alberti F, Augustijn HE, Avalon NE, Beemelmanns C, Barbieri HB, Biermann F, Bridge AJ, Girón EC, Cox R, Crüsemann M, D'Agostino PM, Feuermann M, Gerke J, García KG, Holme JE, Hwang JY, Iacovelli R, Jeronimo Barbosa JC, Kaur N, Klapper M, Köhler AM, Korenskaia A, Kubach N, Lee BT, Loureiro C, Mantri S, Narula S, Meijer D, Navarro-Muñoz JC, Nguyen GS, Paliyal S, Panghal M, Rao L, Sieber S, Sokolova N, Sowa ST, Szenei J, Terlouw BR, Weddeling HG, Yu J, Ziemert N, Weber T, Blin K, van der Hooft JJJ, Medema MH, Zdouc MM. MITE: the Minimum Information about a Tailoring Enzyme database for capturing specialized metabolite biosynthesis. Nucleic Acids Res 2026;54(d1):D635-D642
  66. Ryan B, Fellay J, Thorball CW. Genetic determinants of HIV-1 elite control. Curr Opin HIV AIDS 2026
  67. Santini F, Monzon M, Poncioni S, Bonaretti S, Hirvasniemi J, Froeling M, Cameron D. ORMIR-MIDS: an open standard for curating and sharing musculoskeletal imaging data. JBMR Plus 2026;10(3):ziag013
  68. Sarton-Lohéac G, Romashchenko N, Train CM, Majidian S, Glover N. Correction: Reconstructing Evolutionary Histories with Hierarchical Orthologous Groups. J Mol Evol 2026;94(1):275-278
  69. Schmid RM, Studer E, Kapopoulou A, Yilmaz B, Becker J. Long-term persistence of clonal resistant and multidrug resistant E. coli despite absence of antimicrobial use in weaned dairy heifer rearing systems in Switzerland. Vet Microbiol 2026;315:110884
  70. Schneider-Lunitz V, Kensche PR, Kraatz L, Strubel P, Borufka S, Parala G, Kanitz A, Eils R, Buchhalter I, Twardziok SO. Managing Workflow Executions with WESkit. Bioinformatics 2026:btag091
  71. Shapiro I, Kräuchi C, Luca E, Dettwiler S, Peitzsch M, Qi W, Reul A, Beuschlein F, Maccio U, Nölting S, Debaix H, Hantel C. A novel 2D and 3D model for primary adrenocortical carcinoma of advanced and metastasized stage co-secreting cortisol, aldosterone, testosterone, 18-oxocortisol and 18-hydroxycortisol. Endocr Relat Cancer 2026;33(1):e250385
  72. Sigrist CJA, Cuche BA, de Castro E, Coudert E, Redaschi N, Bridge A. The PROSITE database for protein families, domains, and sites. Nucleic Acids Res 2026;54(d1):D451-D458
  73. Spörri L, Studer JM, Kreuzer M, Rotzetter J, Schärer D, Largiadèr CR, Jaggi D, Zinkernagel MS, Zysset-Burri DC. Linking the microbiome to the complement system in geographic atrophy. NPJ Genom Med 2026
  74. Srivastava M, Louis AA, Martin NS. Predicting the topography of fitness landscapes from the structure of genotype-phenotype maps. Genetics 2026:iyag026
  75. Tauriello G, Lill Y, Sgrignani J, Zoete V, Singer B, Vallat B, Webb BM, Garello T, Bienert S, Feig M, Papaleo E, Burley SK, Sali A, Lill MA, Cavalli A, Dal Peraro M, Schwede T. ModelCIF Update: Supporting Emerging Classes of Computational Macromolecular Models. J Mol Biol 2026:169658
  76. Touré V, Unni D, Krauss P, Marto AB, Kalt K, Stoira N, Pickl M, Österle S. SPHN Connector - a scalable pipeline for generating validated knowledge graphs from federated and semantically enriched health data. BMC Med Inform Decis Mak 2026
  77. Trofimova O, Iuliani I, Bergmann S. Bidirectional genetic and phenotypic links between smoking and striatal iron content involving dopaminergic and inflammatory pathways. Addiction 2026
  78. Tsui JL, Sambaturu P, Pena RE, Too L, Gutierrez B, Inward R, Kraemer MUG, du Plessis L, Pybus OG. Transmission lineage dynamics and the detection of viral importation in emerging epidemics. Epidemics 2026;54:100893
  79. Vallois D, Missiaglia E, Veloza L, Fischer A, Cavalieri D, Rattina V, Bisig B, Roh V, Wiehle L, Sarkis R, Bachy E, Bonnet C, Bruneau J, Cairoli A, De Wind R, Drieux F, Dubois R, Emile JF, Fataccioli V, Laribi K, Ledoux-Pilon A, Lemonnier F, Llamas-Gutierrez F, Morel P, Parrens M, Poullot E, Quintanilla-Martinez L, Sandrini J, Somja J, Xerri L, Tournilhac O, Gaulard P, Siebert R, de Leval L. Correction: Divergent molecular pathways drive monomorphic epitheliotropic and enteropathy-associated intestinal T-cell lymphoma. Leukemia 2026;40(1):252-259
  80. Varliero G, Bauder A, Stierli B, Qi W, Frey B. Erratum: Host-virome associations in the weathering crust of a rapidly retreating temperate Alpine glacier. Microb Genom 2026;12(1)
  81. Vessman B, Guridi-Fernández P, Arias-Sánchez FI, Mitri S. Novel artificial selection method improves function of simulated microbial communities. PLoS Comput Biol 2026;22(1):e1013863
  82. Wang Y, Huang C, Cai G, Andreatta M, Kurum A, Zhao Y, Feng B, Gao M, Carmona SJ, Zhou Z, Sun C, Guo Y, Tang L. Metabolic reinvigoration of NK cells by IL-21 enhances immunotherapy against MHC class I-deficient solid tumors. Cell Rep 2026;45(3):117035
  83. Weiss J, Vecchia L, Domjan D, Cavadini S, Sabantsev A, Kempf G, Pathare GR, Brackmann K, Michael AK, Kater L, Hietter-Pfeiffer E, Haddawi M, Kuber UP, Mühlhäusser S, Grand RS, Stadler MB, Deindl S, Thomä NH. The human BAF chromatin remodeler processes nucleosomes bound by pioneer transcription factors OCT4-SOX2. Mol Cell 2026;86(4):625-639.e8
  84. Wiederkehr F, Paoli L, Richter D, Racunica D, Ruscheweyh HJ, Sperfeld M, O'Brien J, Miravet-Verde S, Streiff AB, Ransome J, Chepkirui C, Priest T, Sintsova A, Salazar G, Bistolas KSI, Sawyer T, Labadie K, Mayer KI, Perdereau A, Reddy MM, Moulin C, Boissin E, Bourdin G, Cailliau J, Iwankow G, Poulain J, Romac S, Tara Pacific Consortium Coordinators, Planes S, Allemand D, Agostini S, Bowler C, Douville E, Forcioli D, Galand PE, Lombard F, Oliveira PH, Thomas OP, Vega Thurber R, Troublé R, Voolstra CR, Wincker P, Ziegler M, Piel J, Sunagawa S. Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity. Nature2026
  85. Wissel D, Mehlferber MM, Nguyen KM, Pavelko V, Tseng E, Robinson MD, Sheynkman GM. A systematic benchmark of high-accuracy PacBio long-read RNA sequencing for transcript-level quantification. Genome Biol 2026
  86. Yang Z, Baudis M. CNAttention: an attention-based deep multiple-instance method for uncovering copy number aberration signatures across cancers. Brief Bioinform 2026;27(1):bbaf696
  87. Yepes-García J, Falquet L. 2Pipe starts with a question: matching you with the correct pipeline for MAG reconstruction. mSystems 2026;11(2):e0084425
  88. van Oosterhout C, Speak SA, Birley T, Hitchings LWG, Bortoluzzi C, Percival-Alwyn L, Urban L, Groombridge JJ, Segelbacher G, Morales HE. Genomic Erosion in the Assessment of Species' Extinction Risk and Recovery Potential. J Hered 2026:esag011
  89. van der Elst A, Herrero-Saboya D, Michon L, Morfouace M, Liechti R, Devanand P, Schulz D, Persoons M, Rusakiewicz S, Eling N, Nicolas PA, Robert MS, Tissot SR, Daniel M, Bodenmiller B, Hong HS, Galot R, Bossi P, Oliveira J, Estrade F, Even C, Lucas S, Saintigny P, Martignetti L, Lefebvre C, Machiels JH. Genomic and immune landscape of recurrent and/or metastatic squamous cell carcinoma of the head and neck progressing on anti-PD1 treatment. Cancer Immunol Res 2026
  90. van der Graaf A, Rizi S, Auwerx C, Kutalik Z. Mendelian randomization linking metabolites with enzymes reveals pathway regulation and therapeutic avenues. Am J Hum Genet 2026;113(2):309-323

Parcourir les autres années